Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIPKVSLCINGSTNLTQYITEVRKFPMLSQEEEVRLAKSWNQCKD----------------------------------------------------------------------ISSAHKLITSHLNLVVKIAMKFKNYGLLLMDLIMEGNMGLIHAVKKFNPDLGFRFSTYAVWWIEASIKDFILKSWSFVKIGTTQAQRRLFFSLRKIKKRILQYTNRETLNNEEIKAISNELS--VSEGDVIQMNYRLACKDQSLNNCIKVGGDSKKELQDMIPCN-SVNQEVTYQNREEKELKETILNNALASLNERSRDIFISRYL-SENTQTLDELSKKYCVSRERIRQLAEQAMSKVKQHIQSESLKFSLHA |
| 2A6H Chain:F ((76-421)) | ----------STSDPVRQYLHEIGQVPLLTLEEEVELARKVE-EGMEAIKKLSEITGLDPDLIREVVRAKILGSARVRHIPGLKETLDPKTVEEIDQKLKSLPKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPV--HMVETINKLSRTARQLQQELGR----EPTYEEIAEAMGPGWDAKRVEETLKIAQE-PVSLETPIGDEK--DSFYGDFIPDEHLPSPVDAATQSLL----SEELEKALSKLSEREAMVLKLRKGLIDG----EEVGAFFGVTRERIRQIENKALRKLKYHESRTRKLRDFLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68889 for 1671 contacts (-41.2/contact) +
2D Compatibility (PS) -28129 + (NN) -9099 + (LL) 2424
1D Compatibility (HY) -10400 + (ID) 3900
Total energy: -117993.0 ( -70.61 by residue)
QMean score : 0.501
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