Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIILVQEVVVEGDINLGQFLKT-EGIIESGGQAKWFLQDVEVLINGVRETRRGKKLEHQDRIDIPELPE-------DAGSFLIIHQGEQ
3J7A Chain:F ((42-114))
-------------IPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKVRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRI---
General information:
TITO was launched using:
RESULT:
Template:
3J7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13950 for 396 contacts (-35.2/contact) +
2D Compatibility (PS) -6397 + (NN) 2307 + (LL) 1692
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -20198.0 ( -51.01 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_3J7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7A-query.scw
PDB file :
Tito_Scwrl_3J7A.pdb
: