Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHHYYQPLWTLVGAGVSSLKSSRKDMESVIPE---GANWIKQAVSSFQPENNSVIL--------------------GDNTVVYYDFLVVAPGLQINWSSIKGLKENIG--KNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNTPIKCGGAPMKIMYLAE--DYFRK------HKIRSNANVIYATPKDALFDV--GKYNKELERIVEERNITVNYNYNLVEIDGDKKVATFEHIK-AYDRKTISYDMLHVTPPMGPLDVVKE-----STLSDSEGWVDVNPTTLQHKSYSNVFALGDASNVPTSKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTS------------CPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFK------KDLLPKMYWYGMLKGLI----- |
| 4G9K Chain:A ((1-471)) | MKVIDPQHSDKPNVLILGSGWGAISFLKHI----DTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDF-LQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFKGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174775 for 3155 contacts (-55.4/contact) +
2D Compatibility (PS) -41928 + (NN) -4111 + (LL) 312
1D Compatibility (HY) -6800 + (ID) 3200
Total energy: -230502.0 ( -73.06 by residue)
QMean score : 0.378
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