Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQ--------------------LWKSTSFKDYDVLIHTAALVHNNS-PQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVG-KSDQIDTQT--PMNPTTNYGISKKFAEQALQELISD-SFKVAIVRPPMIYGAHCPGN------FQRLMQLSK----RLPIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKM-SLVIADIMDETTTKDKA |
| 2C5A Chain:A ((28-338)) | ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEG--------------VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWI------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2C5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -114983 for 2342 contacts (-49.1/contact) +
2D Compatibility (PS) -29589 + (NN) -13004 + (LL) 1344
1D Compatibility (HY) -4400 + (ID) 2150
Total energy: -162782.0 ( -69.51 by residue)
QMean score : 0.463
|
|
|