Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKFIVIKIGGSTL--SDMHPSIINNIKHLRSNNIYPI-IVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLFEITSFDQQYGYVGVPTALNKDALQYLCTK-FVPIINSIGFNNHDGEFYNINADTLAYFIASSLKAPIYVLSNIAGVLIND-VVIPQLPLVDIHQYIEHGDIYGGMIPKVLDAKNAIENGCPKVIIASGNKPNIIESIYNNDFVGTTILNS |
| 1GS5 Chain:A ((1-258)) | MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTD-EGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GS5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200317 for 2190 contacts (-91.5/contact) +
2D Compatibility (PS) -27146 + (NN) -7729 + (LL) 16
1D Compatibility (HY) -16400 + (ID) 3850
Total energy: -255426.0 ( -116.63 by residue)
QMean score : 0.540
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