Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKVRQATEKDVVQIRDVATKAWFNTYLNI--------YAATTVNHLLEASYNEHHLKKRLQ--EQLFLVVEEGNDIVGFANFIYG------EELYLSAHYVKPESQHTGYGTALLNEGLSRFEDKF-EGVYLEVDNKNEEAVAYYKEQGFTILRSYQPEM---YGEKLDLALMYKAF |
1GHE Chain:A ((4-173)) | -AQLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCD------GLKADIAAGSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTE-AGSVAEAFYSALAYTRVGELPGYCATPDGRLHPTAIYFKTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68210 for 1098 contacts (-62.1/contact) +
2D Compatibility (PS) -15595 + (NN) 64 + (LL) 404
1D Compatibility (HY) -7200 + (ID) 1300
Total energy: -91837.0 ( -83.64 by residue)
QMean score : 0.546
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