Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK
2YPI Chain:A ((2-243))-RTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQ---VTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKD--WTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPE-FVDII----


General information:
TITO was launched using:
RESULT:

Template: 2YPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82737 for 2059 contacts (-40.2/contact) +
2D Compatibility (PS) -26146 + (NN) -11498 + (LL) 408
1D Compatibility (HY) -18000 + (ID) 5200
Total energy: -143173.0 ( -69.54 by residue)
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_2YPI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YPI-query.scw
PDB file : Tito_Scwrl_2YPI.pdb: