Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK |
| 4IUN Chain:A ((9-136)) | ---------------------------------------------KEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEF------NEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLEKAEAQAKKEKLNIWSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IUN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1376 for 986 contacts (1.4/contact) +
2D Compatibility (PS) -13438 + (NN) -4081 + (LL) 3472
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -24671.0 ( -25.02 by residue)
QMean score : 0.451
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