Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSDQ
1S0Y Chain:G ((2-45))
-PMISCDMRYGRTDEQKRALSAGLLRVISEATGEPRENIFFVIRE----------------
General information:
TITO was launched using:
RESULT:
Template:
1S0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20780 for 226 contacts (-91.9/contact) +
2D Compatibility (PS) -5073 + (NN) -3513 + (LL) 760
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -32506.0 ( -143.83 by residue)
QMean score : 0.878
(partial model without unconserved sides chains):
PDB file :
Tito_1S0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S0Y-query.scw
PDB file :
Tito_Scwrl_1S0Y.pdb
: