Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQL-DNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLE--IAPEPFTNEALTYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYKQPVCKVC---GSQIETKIIATRNSHYCPVCQK |
| 4PD2 Chain:A ((1-271)) | -PELPEVETVRRELEKRIVGQKI---------ISIEATYPRMVLTGFE--QLKKELTGKTIQGISRRGKYLIFEIGDDFR----LISHLRMEGKY----RLATLDAPR-EKHDHLTMKFA-DGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEP-TYEDFDEKLFR-EKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRTY-SALGSTGKMQNELQVYGKTGEKCSRGHGAEIQKIKVAGRGTHFCPVCQQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70091 for 2150 contacts (-32.6/contact) +
2D Compatibility (PS) -27591 + (NN) -2898 + (LL) 2412
1D Compatibility (HY) -21200 + (ID) 5200
Total energy: -124568.0 ( -57.94 by residue)
QMean score : 0.275
|
|
|