Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKKLLMNFFIVSPLLLATIATDFTPVPLSSNQIIKTAKASTNDNIKDLLDWYSS--GSDTFTNSEV-LDNS-LGSMRIKNTDGSISLIIFPS---PYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSS---DKTGGYWKITMNDGSTYQSDLS--------KKFEYNTEKPPINIDEIKTIEAEIN |
1ET9 Chain:A ((2-204)) | ---------------------------------------SYNTTNRHNLESLYKHDSNLIEADSIKNSPDIVTSHMLKYSVK--NLSVFFEKDWISQEF-----KDKEVDIYALSAQE---------RYEAFGGITLTNSEKKEIKVPVNVWDKSKQQP-PMFITVNKPKVTAQEVDIKVRKLLIKKYDIYNNREQKYS-KGTVTLDLNSGKDIVFDLYYFGNGDFNSMLKIYSNNERIDSTQF-HVDVSIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ET9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21103 for 1295 contacts (-16.3/contact) +
2D Compatibility (PS) -18515 + (NN) 1185 + (LL) 3704
1D Compatibility (HY) -9200 + (ID) 1400
Total energy: -45329.0 ( -35.00 by residue)
QMean score : 0.493
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