Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFKKGVILDAKSVGLKALEVLKEVADFDFYE---VTSPNQIVERSIEAEIMVLN-KVVITQEVLSQLPKLKLICITATGTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEYSQSDI-------FTHISDIKMGLIKGGQWGVIGLGNIGKRVAKLAQAFGAKVVYFSPKDKKE-----EYERLSLEELLKTSGIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLALILET-KDLYYASDVFVKEPFEKDHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTKENIQDFLASQK |
| 2DBQ Chain:A ((1-316)) | --MKPKVFITRE--IPEVGIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEW-KKRGVAWHPKWFLG------YDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYY-NEEL-F--KLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DBQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181679 for 2481 contacts (-73.2/contact) +
2D Compatibility (PS) -32480 + (NN) -11766 + (LL) 1020
1D Compatibility (HY) -14800 + (ID) 4250
Total energy: -243955.0 ( -98.33 by residue)
QMean score : 0.610
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