Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFL---------VHCSQCHGITADGLH--------------GSAQNLL--------RWDKE-EGIMDTIKHGSKG----M------DYPAGEMPAIE-----------MD-EKDAKAIASYVMAELSSVKKT----------KNPQLIDKGKELFESMGCAGCHGNDGKGLQENQ-V----------------------------FAADLTTYG---------TESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 1IQC Chain:A ((15-286)) | -----------------------------------------------------------------------------------------------------------------NADMAELGKMLFFDPRLSKSGFISCNSCHNLSMGGTDNITTSIGHKWQQGPINAPTVLNSSMNLAQFWDGRAKDLKEQAAGPIANPKEMASTHEIAEKVVASMPQYRERFKKVFGSDEVTIDRITTAIAQFEET-LVTPGSKFDKWLEGDKNALNQDELEGYNLFKGSGCVQCHNGPAVGGSSYQKMGVFKPYETKNPAAGRMDVTGNEADRNVFKVPTLRNIELTYPYFHDGGAATLEQAVETMG----RIQLN---REFNKDEVSKIVAFLKTLTGDQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34367 for 1151 contacts (-29.9/contact) +
2D Compatibility (PS) -17557 + (NN) -3053 + (LL) 9032
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -54045.0 ( -46.95 by residue)
QMean score : 0.323
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