Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESID---ANAVHGSDSLENAHNEIAFFFAAREF
2DXF Chain:A ((8-145))
--ERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEEL
General information:
TITO was launched using:
RESULT:
Template:
2DXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69790 for 1035 contacts (-67.4/contact) +
2D Compatibility (PS) -14209 + (NN) -767 + (LL) 272
1D Compatibility (HY) -12800 + (ID) 3450
Total energy: -100744.0 ( -97.34 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_2DXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXF-query.scw
PDB file :
Tito_Scwrl_2DXF.pdb
: