Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTTINHSVELVGIGLHKGVPVKLVLEPLEENQGIVFYRSDLGVKLPLKPENIVDTKMATVLGKDNARISTIEHLLSAVHAYGIDNLKISVDNEEIPIMDGSALTYCMLLDEAGI---KELDAPKKVMEIKQAVEVREGDKFVKIEPDSQLSLNFTIDFNHPVIAKQAHHFVFSKTAYKEQVAKARTFGFLQEVNYLRSIGLAKGGSLNNCIVLDENSILNKEGLRCEKEFVCHKILDAMGDLMVLGMPVMGKYTSFSGSHKLNSMLVKAILADAKNYEVLIASDPAKEFALQKAFA |
| 2GO3 Chain:A ((4-263)) | --EKTVKEKLSFEGVGIHTGEYSKLIIHPEKEGTGIRFFKN--GVYIPARHEFVVHTNHSTDLGFKGQRIKTVEHILSVLHLLEITNVTIEVIGNEIPILDGSGWEFYEAIRKNILNQNREID----YFVVEEPIIVEDEGRLIKAEPSDTLEVTYEGEFKN-FLGRQKFTFV---EGNEEEIVLARTFAFDWEIEHIKKVGLGKGGSLKNTLVLGKDKVYNPEGLRYENEPVRHKVFDLIGDLYLLGSPVKGKFYSFRGGHSLNVKLVKELAKKQ---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172429 for 2224 contacts (-77.5/contact) +
2D Compatibility (PS) -27259 + (NN) -4676 + (LL) 2456
1D Compatibility (HY) -23600 + (ID) 4850
Total energy: -230358.0 ( -103.58 by residue)
QMean score : 0.460
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