Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MRCRVYYEDTDSEGVVYHANYLKYCERARSEFF--FKQNVLPENEEGVFVIRSIKADFFTPASLGQVLEIRTQIKELRKVFVVLFQEIYCIQNASLEPMKPFKVFASEIKFGFVNRSTYSPIAIPKLFKELLSAV
3R87 Chain:A ((1-132))
MSKIYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVIDSDKLATLWNDHGLGFAVYKANMIFQDGVEFAEICDIRTSFTLDGKYKTLWRQEVWRPGASRA-------AVIGDIEMVCLDKEK-RLQPVPADILASMMA-
General information:
TITO was launched using:
RESULT:
Template:
3R87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99054 for 877 contacts (-112.9/contact) +
2D Compatibility (PS) -13275 + (NN) -2614 + (LL) 576
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -122767.0 ( -139.99 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_3R87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R87-query.scw
PDB file :
Tito_Scwrl_3R87.pdb
: