Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYL-NISHLATSLFVPLIEESILEGELLETCMHYYFTPL-EILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNAC---TFPKVEFHASGDVIWLERQAKEWLKL
3IST Chain:A ((6-255))
QAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKAT--RNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIAKKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMG------DGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRFFTTGSTQIFKDIAKDWLNM
General information:
TITO was launched using:
RESULT:
Template:
3IST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -228084 for 2239 contacts (-101.9/contact) +
2D Compatibility (PS) -25950 + (NN) -6756 + (LL) 212
1D Compatibility (HY) -16000 + (ID) 4000
Total energy: -280578.0 ( -125.31 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3IST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IST-query.scw
PDB file :
Tito_Scwrl_3IST.pdb
: