Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETITDLKSVESLKV-GVY-KQLNYVYDTISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLEFSWDYLKKISKELKKR----YA-HIPVILFPKGIGAYLDSI-DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLYDK-NALEEGVEKILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAKTRR |
| 1R3S Chain:A ((17-362)) | DTFLRAAWGEETDYTPVWCMRQAGRYLPEFR-ETRAAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSGILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251349 for 2985 contacts (-84.2/contact) +
2D Compatibility (PS) -36515 + (NN) -17468 + (LL) 104
1D Compatibility (HY) -31200 + (ID) 6450
Total energy: -342878.0 ( -114.87 by residue)
QMean score : 0.589
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