Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNPNLSFYCNECERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLD--SAKNSFVNLLGLKKASGYAQTLKTEILNDLNALEPTYLSLQENLNALLNTLFKGKT
3PDE Chain:A ((9-297))-----IAFEDQWVPALNAPLKQAILADSQ-DAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTF----VPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQ-APEAQWPAYLQFADAFGLAFQIYDDILDVVSS-----------ADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQ--RDDLAAFFSYFDTERV


General information:
TITO was launched using:
RESULT:

Template: 3PDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172095 for 2304 contacts (-74.7/contact) +
2D Compatibility (PS) -28804 + (NN) -12612 + (LL) 656
1D Compatibility (HY) -12000 + (ID) 4700
Total energy: -229555.0 ( -99.63 by residue)
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_3PDE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PDE-query.scw
PDB file : Tito_Scwrl_3PDE.pdb: