Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQSHQNLQSQFFIEHILQILPHRYPMLLVDRIIELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQTGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE
3CF9 Chain:C ((10-159))
---------SQFFIEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE
General information:
TITO was launched using:
RESULT:
Template:
3CF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116763 for 1148 contacts (-101.7/contact) +
2D Compatibility (PS) -15646 + (NN) -2455 + (LL) 784
1D Compatibility (HY) -24000 + (ID) 7400
Total energy: -165480.0 ( -144.15 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_3CF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CF9-query.scw
PDB file :
Tito_Scwrl_3CF9.pdb
: