Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDAS------GSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHV---PALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDK------------------------TTGDFVSPPDAKITYNTRSVT---------PNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNKAIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQQYLSN-----QTYFLQISGLKYTFTDTDDLDHAYKVASVTTED----GTPLKTDQKYKVVINDFLFGGGDGFSAFKKANLVTAIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 3ZTV Chain:A ((8-573)) | -----------------------------------HKAVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKK---------YKNPLVLHAGDAITGTLYFT-LFGGSADAAVMNAGNFHYFTLGNHEFDAGNEGLLKLLEPL-----------------KIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNKTVNS-SSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEKNIEIAQKVNDIDVIVTGDSHYLYGNDELRSLKLP---VIYEYPLEFKNPNGEPVFVMEGWAYSAVVGDLGVKFSPEGIASITRKIPHVLMSSHKLQVKNSEGKWAELTGDERKKALDTLKSMKSISLDDHDAKTDKLIAKYKSEKDRLAQEIVGVITGSAMP-GGSANRIPNKAGSNPEGSIATRFIAETMYNELKTVDLTIQNAGGVRADIL------PGNVTFNDAYTFLPFGNTLYTYKMEGSLVKQVLEDAMQFALVDGSTGAFPYGAGIRYEANETPNAEGK-RLVSVEVLNKTQQWEPIDDNKRYLVGTNAYVAGGKDGYKTFGKLF------------------------------------------------------------------------------------------------------------------NDPKYEGVDTYLP----DAESFIKFMKKHPHFEAYTSSN------------------------------------------------------------------------------VKFNAST |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65780 for 4549 contacts (-14.5/contact) +
2D Compatibility (PS) -55897 + (NN) -17482 + (LL) 10660
1D Compatibility (HY) -22400 + (ID) 5300
Total energy: -156199.0 ( -34.34 by residue)
QMean score : 0.418
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