Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VGLQDELTMMQPVVMKIFSKSVRENRLSHGYLFEGTRGTGKKRTALWLAQSLFCLESTETELACGKCTNCTRIASHNHPDVHLLEPDGASIKIDQVRALKQELSKRGMESDQKVVIIYDAEKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQSRLQPVTFKSLTFDSLLASLTAA----GI--S-EQKARIYASITGSVEEAKAFEESEWFSEARNVVIKLYEGIHHQGTSPLIIIQESWMPLFKEKDKMALGLELLLLLYRDRLHLTLDENYEPICTAQKEMLGQDALRKSLSETTGEIEKILAAKSKLDSNMNTQLLMEQLVLEIQGR |
| 1NJG Chain:A ((20-232)) | -QTFAD-VVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAAS-RTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAI------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84153 for 1624 contacts (-51.8/contact) +
2D Compatibility (PS) -22705 + (NN) -12139 + (LL) 10920
1D Compatibility (HY) -10800 + (ID) 2750
Total energy: -121627.0 ( -74.89 by residue)
QMean score : 0.534
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