Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYDVKFVSNFTDVDDKLIRAANELKLTV------------PEVADRFIGAYFDDVDQLNVAKAS-VNPRV--TENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFK-------DYG-----------KLS--------------------------------------------------------------------------GQE---------LS------------ELQHGARVE-------------------------------------Y------------------------------N-E---RKQDELDF-----------------------TLW------------KAAKPG-EIFWESPFGNGRPGWHIECSA------------------------------LA--------------------KKYL-----------------GDTIDIHAGGQDLVFPHHEDEIAQSEAATGKTFANYWMHNAFLNID-GEKMSKSLGNFITLHDVLKDNDPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGE------YVEEAHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFHELAK--RANIYLAKETVS----I---NVLREFLSMMRLFAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQGTRFRRG |
| 1FFY Chain:A ((48-774)) | ---------------------ETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALDWDKASIKLEKEYTGKELEWVVAQHPFLDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYELPVISPIDDKGVFTEEGGQFEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDDYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTASTINNY-ENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPI--LVHTAEEVWSHTPHV-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84727 for 2824 contacts (-30.0/contact) +
2D Compatibility (PS) -43222 + (NN) -5337 + (LL) 4544
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -147742.0 ( -52.32 by residue)
QMean score : 0.325
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