Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGIT---L-G----NWDKHVLKMLESIKENADFYKNTVSADA-SI-LSFCFSKLTNSLFMDLFEKIDTNATVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
3AQT Chain:A ((43-216))
--KREQTRARLITSARTLMAERGVDNVGIAEITEGANIGTGTFYNYFPDREQLLQAVAEDAFESVGIALDQVLTKLDDPAEVFAGSLRHLVRHSLEDRIWGGFFIQMGAAHPVLMRI----LGPRARRDLLHGLETGRFTIEDLDLATTCTFGSLIAAIQMALS-------DDKDQIFAAA---------------
General information:
TITO was launched using:
RESULT:
Template:
3AQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102589 for 1123 contacts (-91.4/contact) +
2D Compatibility (PS) -16147 + (NN) -4403 + (LL) 1984
1D Compatibility (HY) 1200 + (ID) 950
Total energy: -120905.0 ( -107.66 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_3AQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AQT-query.scw
PDB file :
Tito_Scwrl_3AQT.pdb
: