Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEQEVTRLISASKQDFEKMNGRDLKRSIFQSEGRVIMAQHLLFASQGLVRGVTNTELLAAFGSDMIMLNTFNLEDEKSNLGLQ----GLTLEDLKKRV---NIPLGIYLGCPGENKTSENIIYDAAGMLATDEHLLRAKEIGADFIVLGGNPGSGT-SIQ-----------------------DIIETTKRARKLLGNDVLIFAGKWEDGIDEKVLGDPLAKQDAKEVIKQLIDAGADVIDLPAPGSRHGISVRMIQELVQFIHLYKPGTLAMTFLNSSVEGADQDTIRLIALMMKETGADIHAIGDGGFSGCTTPENVMQLSISLKGKPYTYFRMASRNR |
3VKJ Chain:A ((141-299)) | ------------------------------------------------------QDAIQMIEADAIAVHLN-PAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGI----------------SMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGI-------------RS---GLDAAKAIALGADIAGMALPV----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45853 for 960 contacts (-47.8/contact) +
2D Compatibility (PS) -14617 + (NN) -10770 + (LL) 12236
1D Compatibility (HY) 1200 + (ID) 1050
Total energy: -58854.0 ( -61.31 by residue)
QMean score : 0.551
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