Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLT--LSDLS--DQNVVVDAYGVSPD-------E--AEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDED-GNTLLESKGLREAPYYPTARAQAKQL-E-HLRSHQAEFSWTYISPSAMFEPGERTGD----YQ--I------GKDH---LLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK |
| 2PK3 Chain:A ((13-250)) | MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK---LPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKA--YGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG-KTGDVYNVCS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62642 for 1585 contacts (-39.5/contact) +
2D Compatibility (PS) -22544 + (NN) -10693 + (LL) 372
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -103157.0 ( -65.08 by residue)
QMean score : 0.405
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