Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLCTISDSQALLEVSYKTFDETFRAQNKPENMDAYLKTNFTAKKLSDELKNPHSYFYFVFHQEAIAGYLKLNIGDAQTEEIAGNTIEIERIYVLKSFQKKGLGKELFNQAIEIAKEVDAKKIWLGVWEKNKNAIQFYAKLGFIKNGQHDFFMGDDCQTDIIMIKDL
2DXQ Chain:A ((7-144))
SLRAAGPGDLPGLLELYQVLNPSDP--ELTTQEAG---------AVFAAMLAQPGLTIFVATENGKPVATATLLIVPNLTRA-ARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFVQNKTG------------------
General information:
TITO was launched using:
RESULT:
Template:
2DXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81042 for 932 contacts (-87.0/contact) +
2D Compatibility (PS) -15004 + (NN) -7023 + (LL) 2432
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -103937.0 ( -111.52 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_2DXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXQ-query.scw
PDB file :
Tito_Scwrl_2DXQ.pdb
: