Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQFIVEEAVASGIEDILIVTGKGKRAIEDHFDSVPELENNLREKNKLDLLHLVEETTNINLHFIRQSKPKGLGDAILQAKGFIGNEPFVVMLGDDIVQSKTPCAKQLIDQYEKTHSSVIGVQNVPREETYRYGIIDPDKEVSDRLYNVTGFVEKPNVEDAPSNLAILGRYLLTPEIFKYLETQEAGSGGEIQLTDAINRLNEIQPVFAYDFE--GERFDVGDKFGFIETTLKFALKHPEIKDDV---RDLIIRLG----DELK------------------------ |
| 1FXO Chain:A ((2-293)) | --KRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTP---------QDTPRFQQLLGDGSNW----------GLDLQYAVQPSPDGLAQAFLIGESFIGNDLSALVLGDNLYYGH-DFHELLGSASQRQTGASVFAYHVLDPERY--GVVEFDQG-----GKAISLEEKP--LEPKSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIATLENRQGLKVACPEEIAYRQKWIDAAQLEKLAAPLAKNGYGQYLKRLLTETVY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -109055 for 2140 contacts (-51.0/contact) +
2D Compatibility (PS) -28135 + (NN) -14391 + (LL) 2536
1D Compatibility (HY) -13600 + (ID) 3250
Total energy: -165895.0 ( -77.52 by residue)
QMean score : 0.454
|
|
|