Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAAKNVGTVMSTHVIPRPHTDVEEILPVRVKSDE
4QIF Chain:B ((12-97))
--EALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGHGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILP-------
General information:
TITO was launched using:
RESULT:
Template:
4QIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35032 for 662 contacts (-52.9/contact) +
2D Compatibility (PS) -9502 + (NN) -4223 + (LL) 876
1D Compatibility (HY) -9200 + (ID) 3550
Total energy: -60631.0 ( -91.59 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4QIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QIF-query.scw
PDB file :
Tito_Scwrl_4QIF.pdb
: