Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LQDLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFAT--LQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEGMVG--GQLADLEAENKQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSALSGHDFDDEILLKLADLIALREN |
3AQC Chain:D ((9-239)) | ------FLNPYIIEVEKRLYECIQSDS--ETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDL--IRTAVSLELVHMASLVHDDY--IDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKF-------HQIFSKTILEVCFGEFDQMAD--RFNYPVSFTAYLRRINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYP--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35585 for 1749 contacts (-20.3/contact) +
2D Compatibility (PS) -23992 + (NN) -7345 + (LL) 5548
1D Compatibility (HY) -12400 + (ID) 3900
Total energy: -77674.0 ( -44.41 by residue)
QMean score : 0.400
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