Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRTAQKKGEDFVVFFFTPMCGSCQ-IASRLVDVVIEADGIQTEVAKVNLNYVPDIAQSLEITSVPALVKFKNGQPADLSYQLHDATAIFEFLYSE
4AJ7 Chain:B ((24-87))
-----------VIDFYATWCGPCKMIAPKLEELSQSMSDVV--FLKVDVDECEDIAQDNQIACMPTFLFMKNGQKLD------------------
General information:
TITO was launched using:
RESULT:
Template:
4AJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67807 for 370 contacts (-183.3/contact) +
2D Compatibility (PS) -6502 + (NN) 8 + (LL) 2624
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -78727.0 ( -212.78 by residue)
QMean score : 0.665
(partial model without unconserved sides chains):
PDB file :
Tito_4AJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AJ7-query.scw
PDB file :
Tito_Scwrl_4AJ7.pdb
: