Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTKVEEIRSYLIASIQNGKLAPGDRLPSIRQLANQFSCNKDTVQRVLMELRFDNYVYAKPRSGYYVFDSHEEEVEEGVSLPNSEIANIAYDDFRLCLNETLIGREDYLFNYYYRQEGLLDLSKAVAKLMEE-TGVYVPLDDIVITAGTQQALFILTQVTFPNRKSRVLIEEPTYPRMIELIKTQNLPYETISRGTHGIDFQRLEEIFQT-----QSIKFFYVIPRMHNPLGTSYNPVEMKRLIEMAEKYDVYIVEDDYMSDFASQ----SPLHYYDTHGRVIYLKSFSKAIFPALRLAAICLPQALKSTFMAYKKLMDYDTNLILQKALALYIENGLYGKNSQYLKYRYQKDLANSKSILADQPN-LPPYSLHHDSVLFDCSKL------DNFKILRQYGDTLENYFCQKSHQSLLQVKNDSCLKQFLGSL |
| 3AOW Chain:A ((75-405)) | -----------------------------------------------------------------------TSDI-ISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQ-YGTTKGFTPLRETLMKWLGKRYGISQ-DNDIMITSGSQQALDLIGRVFL-NPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179538 for 2577 contacts (-69.7/contact) +
2D Compatibility (PS) -34430 + (NN) -19857 + (LL) 4912
1D Compatibility (HY) -16400 + (ID) 3550
Total energy: -248863.0 ( -96.57 by residue)
QMean score : 0.464
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