Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKL---CKQLIETLVESMGIT-VPVAIHLDHGHYDDALECIEV---GYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGE--LAPIEDAKAMVET-GIDFLAAGIGNIHGPYPANWEGLDLDHLKKLTEAVPGF--PIVLHGGSGIPDDQIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA- |
| 1GVF Chain:A ((2-285)) | SIIS---TKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFK-------HIALEEIYALCSAYSTTYNMPLALHLDHHE--SLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGS----------AFLTDPQEAKRFVELTGVDSLAVAIGTAHG-LYSKTPKIDFQRLAEIREVV---DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENP---------QGNDPRYYMRVGMDAMKEVVRNKINVCGSANRIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127661 for 2204 contacts (-57.9/contact) +
2D Compatibility (PS) -29344 + (NN) -20205 + (LL) 1376
1D Compatibility (HY) -18800 + (ID) 4900
Total energy: -199534.0 ( -90.53 by residue)
QMean score : 0.620
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