Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIKFEHVSKVY--GEKEALSDLTLSIKDGEIFGLIGHNGAGKTTTISILTSIIDATYGQVYIDDLLLTE-HRDQIKKKIGYVPDSPDIFLNLTAEEYWYFLAKIYDVAPEDIEARITK--LVDIFELEEQRYNPI-----ESFSHGMRQKVIVIGALLPNPDIWILDEPLTGLDPQASFDLKEMMKEHAKNGKTVIFSTHVLAVAEQLCDRIGILKQGKLIFVGSLGELKMQYPDKDLETIYLELAGRQANREG |
| 3B60 Chain:A ((10-581)) | WQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAY--ARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK-NRTSLVIAHRLSTIEQ-ADEIVVVEDGIIVERGTHSELLAQ------HGVYAQLHKMQFG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135121 for 1811 contacts (-74.6/contact) +
2D Compatibility (PS) -25085 + (NN) -7777 + (LL) 476
1D Compatibility (HY) -11200 + (ID) 3150
Total energy: -181857.0 ( -100.42 by residue)
QMean score : 0.477
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