Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDTMILNDNHKIPTLGLGTWM---INNDRVAQVVKDAIELGYRHINTAQAYNNEKGVGVGIK----ESGITRESLFVTTKIAAEHKNYESATKSIDQSLEALGLDCIDLMIIHSP---QPWKEWRETDKHFDQGNL
1XF0 Chain:A ((10-133))
------LNDGHFMPVLGFGTYAPPE---SKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFD
General information:
TITO was launched using:
RESULT:
Template:
1XF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33619 for 738 contacts (-45.6/contact) +
2D Compatibility (PS) -11571 + (NN) -394 + (LL) 692
1D Compatibility (HY) -8400 + (ID) 2300
Total energy: -55592.0 ( -75.33 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1XF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XF0-query.scw
PDB file :
Tito_Scwrl_1XF0.pdb
: