Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTIEKIDEAIHRYYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYD-VAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFKADVTVRLIELLSMSAGSFGMVGGQMLD-MKGENKVLSIDDLSLIHINKTGRLLAYP----FVAAGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGKTPNKDIVAEKTTYPNLLGLDKSQEILDDTLKKAQAIFQNLEKKANF-NARKIIDIIEGLRLNG |
| 3OYR Chain:B ((47-297)) | ----------------QSDVAIIPALAEHLIAA---GGKRLRPLMTVAAARLAGAD--NDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVETN-----SMKALEILARA--SRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSE----ALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIARSGPREAEFWER--AIGRREQTEADFRRARELIIGSGALDATL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41131 for 1914 contacts (-21.5/contact) +
2D Compatibility (PS) -25623 + (NN) -8882 + (LL) 3004
1D Compatibility (HY) -12800 + (ID) 4250
Total energy: -89682.0 ( -46.86 by residue)
QMean score : 0.292
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