Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKLKYVSRGGLKLEKALQVFEISVADKLTIDIGASTGGFTDVMLQSGARLVYAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQKED----FKEGLPEFASIDVSFISL---NLILPALKEILVDGGQVVALIK-PQFEAGREQ---I-G-K--NGIVKDKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGHGNIEFLMHLQKCQDPQNLVLDQIQDVIEKAHKEFKKNEEE |
| 3DLC Chain:A ((43-203)) | ---------------------------------------------------------------------------------TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIA-LKNIADANL-NDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEIILGDEGFWIIISKTDQEVI------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52421 for 1027 contacts (-51.0/contact) +
2D Compatibility (PS) -15187 + (NN) -1807 + (LL) 8216
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -66049.0 ( -64.31 by residue)
QMean score : 0.427
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