Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILEKAPAKI-NLSLDVTRKRPDGYHEVEMIMTTIDLADRIELTELAEDEVRVSSHNRFVP-DDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDV---------SFCVYGGTALATGRGE-KIKHISTPPHCWVILAKPTIGVSTAEVYRAL------KLDGIEHPDVQGMIEAIEEKSFQKMCSRLGN--VLESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD |
| 1FWK Chain:A ((1-296)) | MKVRVKAPCTSANLGV--------GFDVFGLCLKEPY--DVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKEEVKD-KVYGITISGSGPSIIAFPK-EEFIDEVENILRDYYENTIRTEVGKGVEVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162562 for 2411 contacts (-67.4/contact) +
2D Compatibility (PS) -29492 + (NN) -6004 + (LL) 684
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -215924.0 ( -89.56 by residue)
QMean score : 0.438
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