Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQ--FLNMAVEIKTSLNPFELLELTQQIENELGRTREVRWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
3MCO Chain:B ((26-175))
------IGIGTNSGFTIENIHLAITALESQQNIRIIRKASLYSSKAV-------IRFLNTAVKISSSLKPDELLVLLKDIELKI----------RVIDLDILAAEDLILETDKLTIPHKELINRSFALAPLLELSK---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92528 for 792 contacts (-116.8/contact) +
2D Compatibility (PS) -11449 + (NN) -1720 + (LL) 3492
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -112305.0 ( -141.80 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_3MCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MCO-query.scw
PDB file :
Tito_Scwrl_3MCO.pdb
: