Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRIRKAPAGILGFPVAPFNTQGKLEEEALFQNIEFLLNEGLEAIFIACGSGEFQSLSQKEYEQMVEVAVSAAGGKVPVYTGV-GGNLSTALDWAQLSEKKGADGYLILPPYLVHGEQEGLYQYAKTIIESTDLNAILYQ---RDNAVLSVEQIKRLTECEQLVGVKDGVGNMDLNINLVYTI--GDRLGWLNGMPMAEVTMPAYLPIGFHSYSSAISNYIPHISRMFYDALKNGNDELVKELYRHVILPINDIRKQR--K-GYAVSLIKAGMEIMGLNVRNTARPPVGPVEKDHYQQLEAILKQAADRFPKKAATV
4XKY Chain:A ((3-299))-----IPLSGIIPPLVTPLLDDDVLDVEGLQRLIEHLIAGGVHALFVLGTTGESQSLSYKLRMEMIKNTCRIAKGRLPVLVCISDTSIVESVNLACLAADHGADAVVSAPPYYFATGQPELIEFYEHLLPQLPLPLFLYNMPTHTKVNFAPATIQRIAENPGVIGFKDSSANTVYFQSVMYAMKDNPDFSMLVGP---EEIMAESVLLGAHGGVNGGANMFPELYVSLYNAAKNADMEEVRRLQEKV-MQISATIYTVGQHGSSYLKGLKCALSLLGICSDY-VAAPFHKFEQRERGKIWKALQNLG----------


General information:
TITO was launched using:
RESULT:

Template: 4XKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1605 -196116 -122.19 -680.96
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -122.19
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_4XKY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XKY-query.scw
PDB file : Tito_Scwrl_4XKY.pdb: