Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFAKRFKTSLLPLFAGFLLLFHLVLAGPAAASAETANKSNELTAPSIKSGTILHAWNWSFNTLK-HNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTTSDYA----------AISNEVK-----SIPNWTHGN-------TQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLDRALNDGADGFRFDAAKHIELPDDGSYGSQFWPNITNT------------SAEFQYGEILQDSAS--RDAAYANYMDVTASNYGHSIRSALKNRNL-GVSNISHYA---SDVSADKLVTWVESHDTYANDDEES----TWMSDDDIRLGWAVIASRS-GSTPLFFS--RPEGGGNGV------RFPGKSQIG--------DRGSALFE----DQAITAVNRFHNVM-AGQPEELSNP-NGNNQIFMNQRGSHGVVLANAGSSSVSINTATKLPDGRYDNKAGAG---------SFQV-NDGKLTGTINA---RSVAVLYPDDIAKAPHVFLENYKTGVTHSFNDQLTITLRADANTTKAVYQINNGPETAFKDGDQFTIGKGDPFGKTYTIMLKGTNSDGVTRTEKYSFVKRDPASAKTIGYQNPNHWSQVNAYIYKHDGSRVIELTGSWPGKPMTKNADGIYTLTLPADTDTTNAKVIFNNGSAQVPGQNQPGFDYVLNGLYNDSGLSGSLPH
4X9Y Chain:A ((4-494))------------------------------------------PNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIY---NPFRPWWERYQPVSY-KLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLTGLLDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWP--------GDIKAILDKLHNLNSNWFPAGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGFVPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEHRWRQIRNMVIFRNVVDGQPFTNWYDNGSNQVAFGRG---NRGFIVFNNDDWSFSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAES------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4X9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2337 -141551 -60.57 -345.25
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -60.57
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.352

(partial model without unconserved sides chains):
PDB file : Tito_4X9Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4X9Y-query.scw
PDB file : Tito_Scwrl_4X9Y.pdb: