Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLFKSFDASEKTQLICFPFAGGYSASFRPLHA-FLQGECEMLAAEPPGHGTNQTSAIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQ-R---K-KVS---HLP-DDQFLDHIIQL-GGMPAELVE-NKEVMSF--------FLPSFRSDYRALEQFE----LYDLAQIQSPVHVFNGLDDKK-CIRDAEGWKKWAKDITFHQFDG-GHMFLLSQTEEVAERIFAILNQHPIIQP
4PW0 Chain:A ((28-282))----YRSLGAPSDIPLICFQHFTGTLDNWDPLITNGLSKGRQLIIFDNKGVGLSSGTTPDNVAAMTADALEFITALGIRYFDVLGFSLGGFIVQYMAHIQPD---MIRKIIIVGAAPQGVKVLHTFPDLIARAMQLEPKERFLFIFFEQSEHSRSKGLATLGRLYERTTDRDQDASAQAIGAQLTAITNWGKKTPSFEITSIQHPVFVVQGSNDEMMDTYNSYELFKQLPDAILSLYPDAAHGSFYQYPELFVSQTEYFLDS------


General information:
TITO was launched using:
RESULT:

Template: 4PW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1257 -144920 -115.29 -632.84
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -115.29
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_4PW0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PW0-query.scw
PDB file : Tito_Scwrl_4PW0.pdb: