Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRMEAMSLDYFLSYPRLFWPKFKELFQMKMSGSFEPNEGHLLLAELEKQGKQVDIFTQNIDGLHKKAGSRHVYELHGSIQTAACPACGARYDL---PHLLEREVPECTAAGNNGDICGTVLKTDVVLFGDAVMH--FDTLYEKLDQADLLLVIGTSLEVAPARFVPEDASLIPGMKKVIINLEP--TYCDSLFDMVIHQKIGEFARSLGMKK
1M2J Chain:A ((3-232))-EKLLKTIAESKYLVALTGAGVSAESGIPTFRGKDGLWNRYRPE-ELANPQAFAKDPEKVWKWYA--WRMEKVFNAQPNKANQAFAELERLGVLKCLITQNVDDLHERAGSRNVIHLHGSLRVVRCTSCNNSFEVESAPKI--PPLPKC-------DKCGSLLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASLP---LIVKQRGGAIIEINPDETPLTPIADYSLRGKAGEV--------


General information:
TITO was launched using:
RESULT:

Template: 1M2J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1179 -120602 -102.29 -540.82
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -102.29
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_1M2J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M2J-query.scw
PDB file : Tito_Scwrl_1M2J.pdb: