Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEVNKEQIEQAVRQILEAIGEDPNREGLLDTPKRVAKMYA-EVFSGLNEDPKEHFQTI-FGENH---EELVLVKDIAFHSMCEHHLVPFYGKAHVAYIPRGGKVTGLSKLARAVEAVAKRPQLQERITSTIAESIVETLDPHGVMVVVEAEHMCMTMRGVRKPGAKTVTSAVRGVFKDDAAARAEVLEHIKRQD
4DU6 Chain:E ((35-220))--ETRKTRIQAHMTEVMHLLNLDLTDDSLADTPRRIAKMYVDEIFSGLD---YENFPKITLIQNKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDS-VIGLSKINRIVQFFAQRPQVQERLTQQILLALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVR---


General information:
TITO was launched using:
RESULT:

Template: 4DU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 790 -3384 -4.28 -18.69
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain E : 0.84

3D Compatibility (PKB) : -4.28
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_4DU6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DU6-query.scw
PDB file : Tito_Scwrl_4DU6.pdb: