Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHILVVGVDYKSAPIEIREKVSFQPNELAEAMVQLKEEKSILENIIVSTCNRTEIYAVVDQLHTGRYYIKKFLADWFQLSKEELSPFLTFYESDAAVEHLFRVACGLDSMVIGETQILGQVRDSFKTAQQEKTIGTIFNELFKQAVTVGKRTHAETDIGSNAVSVSYAAVELAKKIFGNLSSKHILILGAGKMGELAAENLHGQGIGKVTVINRTYLKAKELADRFSGEARSLNQLESALAEADILISSTGASEFVVSKEMMENANKLRKGRPLFMVDIAVPRDLDPALNDLEGVFLYDIDDLEGIVEANMKERRETAEKVELLIEETIVEFKQWMNTLGVVPVISALREKALAIQSETMDSIERKLPHLSTREKKLLNKHTKSIINQMLRDPILKVKELAADADSEEKLALFMQIFDIEEAAGRQMMKTVESSQKVHSFKKAESKAGFSPLVSE
2HK9 Chain:B ((121-194))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSLIPEVKEKSILVLGAGGASRAVIYALVKEG-AKVFLWNRTKEKAIKLAQKFPLEV--VNSPEEVIDKVQVIVNTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 305 -51535 -168.97 -696.42
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.56

3D Compatibility (PKB) : -168.97
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.780

(partial model without unconserved sides chains):
PDB file : Tito_2HK9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HK9-query.scw
PDB file : Tito_Scwrl_2HK9.pdb: