Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIALDTYLVLNSVIAGYQFLKDSYQFYDSGALLLTAVSLLLSYHVCAFLFNQYKQVWTYTGLGELIVLLKGITLSAAVTGVIQYAVYHTMFFRLLTACWVLQLLSIGGTRILSRVLNESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIMGLPVIGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRTAGQIRDVKAEDLLGRKP------VTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFQPKEIILLGHGENSIHSIYTELNGRFG-KHIVFHTEIADVQDRD--KMFTLMKKYEPHVVYHAAAHKHVPLM--EHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVNPANVMGATKRFAEMIIMNLGKVSRTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRLVIQAGALAKGRQIF--VLDMG-EPVKIVDLAKNLIHLSGYTTEQ-------------------VPIEFTG-IRPGEKMYEELLNKNEVHAEQIFPKIHIGKAV-DG-D--WPVLMRFIEDFHELPE--A-DLRARLFAAINTSEEMTAASVH
3PVZ Chain:A ((6-386))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SILSLIGRDTELFHQDINANEKELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADG--QYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDKAANPVNMMGASKRIMEMFLMRKS--EEIAISTARFANVAFSDGSLLHGFNQRIQKNQPI-VAPNDIKRYFVTPQESGELCLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQLGYEPHLCESEDEARELAKTLPAQGKWPCLFTSS---------EFFTDKETLDMARFDNLGIIKNDSLYQQELLELFEQKIGQMKTDRQWTKEEIVQLFFIMIPDF---------


General information:
TITO was launched using:
RESULT:

Template: 3PVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1740 10373 5.96 31.34
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 5.96
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_3PVZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PVZ-query.scw
PDB file : Tito_Scwrl_3PVZ.pdb: