Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIALPALEGVEHRHVDVAEGVRIHVADAGPADGPAVMLVHGFPQNWWEWRDLIGPLAADGNRVLCPDLRGAGWSSAPRSRYTKTEMADDLAAVLDGLGV-AKVKLVAHDWGGPVAFIMMLRHPEKVTGFFGVNTVAPWVKRDL-GMLRN-MWR-FWYQIPMS-LPVIGPRVISDPKGRYFRL-LTGWVGGGFRVPDDDVRLYLDCMREPGHAEAGSRWYRTFQTREMLRWLRGEYNDARVDVPVRWLHGTGDPVITPDLLDGYAERASDFEVELVDGVGHWIVEQRPELVLDRVRAFLAAGTEQRD |
| 4DM7 Chain:A ((28-319)) | ---FPVPNGFESAYRE-VDGVKLHYVKGG--QGPLVMLVHGFGQTWYEWHQLMPELAK-RFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMDAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALN--ESVRQ-NAELAKTRLQMPTMTLAGGGHGGMGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172508 for 2565 contacts (-67.3/contact) +
2D Compatibility (PS) -30462 + (NN) -10115 + (LL) 1252
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -230183.0 ( -89.74 by residue)
QMean score : 0.417
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