Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTGSVTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTVRVATGPVPGARVVSAPTEV |
| 1UEK Chain:A ((1-268)) | -----MERLAPAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEPVSS-GLHFQG------PYGRENLAYRAASLYLEAAGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEV---DLFALARTLGADVPFFLLGRGAEARGVGERLKPL-ALPPVPAVVFFPGLRVPTPLVYRAVRPEDFGPDLP--------VEAILEALARGEEPPYWNSLEGPAFRLFPELKEVRGRMRALGLRGVLMSGSGSAFFGLAEGPDHARRAAEALRAWGRAWAGTLGGG-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -198286 for 2348 contacts (-84.4/contact) +
2D Compatibility (PS) -29959 + (NN) -17759 + (LL) 1268
1D Compatibility (HY) -13600 + (ID) 4550
Total energy: -262886.0 ( -111.96 by residue)
QMean score : 0.430
|
|
|