Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSLLPA--HPQLEVLQGDITDADVCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGVQRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT-MFRKLFESVLKGH-VKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 3KO8 Chain:A ((1-310)) | --------------MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGA-GIKGDVVFHFAANPEVRLS----TTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADV-IPTPEEEPYK--PISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVL----QRKSYLYVRDAVEATLAAWKKFEE-MDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEI--RLV------------------------------GDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157451 for 2624 contacts (-60.0/contact) +
2D Compatibility (PS) -31178 + (NN) -12216 + (LL) 6372
1D Compatibility (HY) -10800 + (ID) 3350
Total energy: -208623.0 ( -79.51 by residue)
QMean score : 0.413
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