Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGP-D---GVLRPTHCGATLIAGLD-M--DSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFR-GGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAG--ESLGFT-SGGVRLTRTKTRP-Y----LGDLGAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGA-GYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANS--P-VADVIDRWG |
| 4PGA Chain:A ((8-337)) | ----------KLANVVILATGGTIAGAGASAANSATYQAAKVGVDKLIAGVPELADLANVRGEQVMQIASESITNDDLLKLGKRVAELADSNDVDGIVITHGTDTLEETAYFLNLVQKTDKPIVVVGSMRPGTAMSADGMLNLYNAVAVASNKDSRGKGVLVTMNDEIQSGRDVSKSINIKTEAFKSAWGPLGMVVEGKSYWFRLPAKRHTVNSEFDIKQISSLPQVDIAYSYGNVTDTAYKALAQNGAKALIHAGTGNGSVSSRVVPALQQLR-KNGTQIIR--SSHVNQGGFVLRNAEQ--PDDKNDWVVAHDLNPEKARILAMVAMTKTQDSKELQRIFWEY- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -228595 for 2742 contacts (-83.4/contact) +
2D Compatibility (PS) -34406 + (NN) -22388 + (LL) 276
1D Compatibility (HY) -15200 + (ID) 4150
Total energy: -304463.0 ( -111.04 by residue)
QMean score : 0.521
|
|
|